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Cahit ÖrekTürkçe

Cahit Örek

Computational and theoretical chemistry

I am a lecturer in the Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University. I work in computational and theoretical chemistry. I calculate the electronic structure of molecules and surfaces using density functional theory (DFT) and ab initio methods, and compare the results with experimental spectroscopic data.

Title
Lecturer, PhD
Institution
Kastamonu University
Department of Genetics and Bioengineering
Fields
Theoretical chemistry, Spectroscopy, Organic chemistry, Bioengineering
Contact
iletisim@cahit.info
Profiles
ORCIDGoogle ScholarWeb of ScienceResearchGateUNIS
Cahit Örek at his desk in a white lab coat

Background

I completed my undergraduate degree in Mathematics and Science Education at İnönü University. I received my MSc and PhD in chemistry from Fırat University, and during my doctorate I completed a second MSc in physics at the same university. Training in both chemistry and physics directly supports my work in computational chemistry, which draws on both fields.

I have been at Kastamonu University since 2015. I have been trained on the main instruments of the central research laboratory, so I also know the experimental methods that measure the quantities I calculate. Since 2023 I have been deputy director of the Central Research Laboratory (MERLAB) and an associate editor of Turkish Computational and Theoretical Chemistry.

Research

I have 34 publications; the first appeared in 2011. My early work was on the synthesis and biological activity of triazole and phosphinic acid derivatives. I then studied the optical and electronic properties of organic semiconductors. In recent years I have carried out first-principles calculations on materials such as doped zinc oxide, hydroxyapatite and graphene. In most of my studies I evaluate experimental measurements together with computational results.

Software

Alongside research, I develop laboratory software. I built and maintain LabSIS, which manages the laboratory workflow from sample registration to the electronically signed report; LabNET, an ISO/IEC 17025 quality management application; and an application that calculates and reports soil analysis results. The laboratory needed them because its specific requirements could not be met by off-the-shelf products.

Computational chemistry and software development support each other. Both require processing large datasets reproducibly. My writing on this site will mostly be about this overlap, in particular working efficiently with AI tools and the relationship between free software and AI.

Positions

2023–Deputy directorCentral Research Laboratory (MERLAB), Kastamonu University
2023–Associate editorTurkish Computational and Theoretical Chemistry
2015–LecturerKastamonu University, Department of Genetics and Bioengineering
2007–2008Laboratory supervisorŞitoğlu Pazarlama Tic. Ltd. Şti.

Education

2012–2018PhD in ChemistryFırat University, Graduate School of Natural and Applied Sciences
2014–2018MSc in PhysicsFırat University, Graduate School of Natural and Applied Sciences
2009–2012MSc in ChemistryFırat University, Graduate School of Natural and Applied Sciences
2002–2007BSc in Mathematics and Science Educationİnönü University, Faculty of Education

Instruments

Trained and certified on the main instruments of the central research laboratory:

SEMXRFICP-OESGC-MSLC-MS/MSHPLCAASCHNSBETTGA/DTA-DSC